cdf format so that they can be interactively used with the free CDF Player.Ģ017: see the note here-below for an important update about the functionality of CDF Player as a browser plugin. The Coffalyser digitalMLPA User Manual contains information on how to use Coffalyser Definition Files to start an analysis from the command line.Some of the demonstrations presented in this site were made with the software Wolfram Mathematica, and exported in the. This can be useful in automated analysis pipelines.

For advanced users, it is possible to open and edit Coffalyser Definition Files directly in a standard text editor.

with just the sample and barcode definitions but without reference to the FASTQ files. The separate Definition Editor included with Coffalyser digitalMLPA can be used to create a (partial) Coffalyser Definition File prior to analysis, e.g.The file will be stored in the location specified in the first step of the wizard. Coffalyser digitalMLPA allows you to create a Coffalyser Definition File using an easy wizard when starting an analysis.

This includes analysis settings, file locations, sample sheets and optional data such as sample names, sample types, genders and experiment types.Ĭoffalyser Definition Files can be created in three different ways: Coffalyser Definition Files (.cdf) contain the information required for the analysis of an experiment with Coffalyser digitalMLPA.

What ioens cdf files